Package: sleepr 0.3.0

Quentin Geissmann

sleepr: Analyse Activity and Sleep Behaviour

Use behavioural variables to score activity and infer sleep from bouts of immobility. It is primarily designed to score sleep in fruit flies from Drosophila Activity Monitor (TriKinetics) and Ethoscope data. It implements sleep scoring using the "five-minute rule" (Hendricks et al. (2000) <doi:10.1016/S0896-6273(00)80877-6>), activity classification for Ethoscopes (Geissmann et al. (2017) <doi:10.1371/journal.pbio.2003026>) and a new algorithm to detect when animals are dead.

Authors:Quentin Geissmann [aut, cre]

sleepr_0.3.0.tar.gz
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sleepr.pdf |sleepr.html✨
sleepr/json (API)

Peer review:

Bug tracker:https://github.com/rethomics/sleepr/issues

On CRAN:

biological-data-analysisneuroscience

7 exports 6 stars 1.40 score 2 dependencies 1 mentions 61 scripts 192 downloads

Last updated 3 years agofrom:f85bbc56ac. Checks:OK: 7. Indexed: yes.

Exports:bout_analysiscurate_dead_animalsmax_velocity_detectormax_velocity_detector_legacysleep_annotationsleep_dam_annotationvirtual_beam_cross_detector

Dependencies:behavrdata.table