Package: damr 0.3.7

Quentin Geissmann

damr: Interface to Drosophila Activity Monitor System Result Files

Loads behavioural data from the widely used Drosophila Activity Monitor System (DAMS, TriKinetics <https://trikinetics.com/>) into the rethomics framework.

Authors:Quentin Geissmann [aut, cre], Hadley Wickham [aut]

damr_0.3.7.tar.gz
damr_0.3.7.zip(r-4.5)damr_0.3.7.zip(r-4.4)damr_0.3.7.zip(r-4.3)
damr_0.3.7.tgz(r-4.4-any)damr_0.3.7.tgz(r-4.3-any)
damr_0.3.7.tar.gz(r-4.5-noble)damr_0.3.7.tar.gz(r-4.4-noble)
damr_0.3.7.tgz(r-4.4-emscripten)damr_0.3.7.tgz(r-4.3-emscripten)
damr.pdf |damr.html✨
damr/json (API)

# Install 'damr' in R:

install.packages('damr', repos = c('https://rethomics.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/rethomics/damr/issues

Datasets:

single_file_metadata - A simple toy metadata defining the experimental conditions of 32 animals monitored at the same time in a single DAM2 monitor. Each animal has its own channel (region_id), as well as a condition and genotype. It serves as an example for link_dam_metadata.
two_files_metadata - A toy metadata defining the experimental conditions of 64 animals monitored at the same time in two separate DAM2 monitors. Each animal has its own channel (region_id), as well as a condition and genotype. It serves as an example for link_dam_metadata.

On CRAN:

biological-data-analysis parsing

4.40 score 6 stars 28 scripts 380 downloads 8 exports 27 dependencies

Last updated 8 months agofrom:d260c69695. Checks:OK: 1 NOTE: 6. Indexed: yes.

Target	Result	Date
Doc / Vignettes	OK	Nov 05 2024
R-4.5-win	NOTE	Nov 05 2024
R-4.5-linux	NOTE	Nov 05 2024
R-4.4-win	NOTE	Nov 05 2024
R-4.4-mac	NOTE	Nov 05 2024
R-4.3-win	NOTE	Nov 05 2024
R-4.3-mac	NOTE	Nov 05 2024

Exports:damr_example damr_example_dir link_dam_metadata link_dam2_metadata load_dam load_dam2 read_dam_file read_dam2_file

Dependencies:behavr bit bit64 cli clipr cpp11 crayon data.table fansi glue hms lifecycle magrittr pillar pkgconfig prettyunits progress R6 readr rlang tibble tidyselect tzdb utf8 vctrs vroom withr

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
Get path to damr example	damr_example damr_example_dir
Link DAM2 or DAM5 metadata to result files	link_dam2_metadata link_dam_metadata
Load DAMS data from one or several continuous text files	load_dam load_dam2
Reads data from a single DAM2 single beam or a DAM5 multibeam file	read_dam2_file read_dam_file
A simple toy metadata defining the experimental conditions of 32 animals monitored at the same time in a single DAM2 monitor. Each animal has its own channel (region_id), as well as a condition and genotype. It serves as an example for link_dam_metadata.	single_file_metadata
A toy metadata defining the experimental conditions of 64 animals monitored at the same time in two separate DAM2 monitors. Each animal has its own channel (region_id), as well as a condition and genotype. It serves as an example for link_dam_metadata.	two_files_metadata