Package: behavr 0.3.2
behavr: Canonical Data Structure for Behavioural Data
Implements an S3 class based on 'data.table' to store and process efficiently ethomics (high-throughput behavioural) data.
Authors:
behavr_0.3.2.tar.gz
behavr_0.3.2.zip(r-4.5)behavr_0.3.2.zip(r-4.4)behavr_0.3.2.zip(r-4.3)
behavr_0.3.2.tgz(r-4.4-any)behavr_0.3.2.tgz(r-4.3-any)
behavr_0.3.2.tar.gz(r-4.5-noble)behavr_0.3.2.tar.gz(r-4.4-noble)
behavr_0.3.2.tgz(r-4.4-emscripten)behavr_0.3.2.tgz(r-4.3-emscripten)
behavr.pdf |behavr.html✨
behavr/json (API)
# Install 'behavr' in R: |
install.packages('behavr', repos = c('https://rethomics.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/rethomics/behavr/issues
biological-data-analysisdata-structuresethomics
Last updated 3 years agofrom:f1fa5a79bf. Checks:OK: 5 NOTE: 2. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Nov 11 2024 |
R-4.5-win | NOTE | Nov 11 2024 |
R-4.5-linux | NOTE | Nov 11 2024 |
R-4.4-win | OK | Nov 11 2024 |
R-4.4-mac | OK | Nov 11 2024 |
R-4.3-win | OK | Nov 11 2024 |
R-4.3-mac | OK | Nov 11 2024 |
Exports:behavrbin_applybin_apply_allbind_behavr_listdayshoursis.behavrmetaminsrejoinsetbehavrsetmetastitch_ontoy_activity_datatoy_dam_datatoy_ethoscope_dataxmv
Dependencies:data.table
Readme and manuals
Help Manual
Help page | Topics |
---|---|
An S3 class, based on data.table, to store ethomics data | behavr is.behavr setbehavr |
Bin a variable (typically time) and compute an aggregate for each bin | bin_apply bin_apply_all |
Put together a list of behavr tables | bind_behavr_list |
Retrieve and set metadata | meta setmeta |
Print and summarise a behavr table | print.behavr summary.behavr |
Join data and metadata | rejoin |
Stitch behavioural data by putting together the same individuals recorded over different experiments on the basis of a user-defined identifier | stitch_on |
Time conversion utilities | days hours mins time_conversion |
Generate toy activity and sleep data mimicking Drosophila behaviour in tubes | toy_activity_data toy_dam_data toy_ethoscope_data |
Expand a metavariable and map it against the data | xmv |